Title Page
Contents
Abstract 10
Ⅰ. INTRODUCTION 12
Ⅱ. MATERIALS AND METHODS 14
1. Experimental animal model and Injection group setting 14
2. Total RNA extraction and microarray analysis 15
3. Principal component analysis (PCA) analysis 16
4. Differential expressed genes (DEGs) analysis 17
5. Hierarchical Clustering Analysis 18
6. Gene enrichment analysis 19
Ⅲ. RESULTS 20
1. Differentiate according to EPO or UCB or UCB+EPO combination treatment. 20
2. Approach 1 - The analysis flow of the whole gene and the DEGs between each group were calculated. 22
3. Genes specifically expressed in comparison of each group were identified. 30
4. Upregulation of co-administered EPO and UCB was confirmed by gene ontology. 32
5. Approach 2 - The flow of gene analysis excluding immune-related genes and the DEGs between each group was calculated. 35
6. Genes specifically expressed in comparison of each group were identified. 43
7. Upregulation of co-administered EPO and UCB was confirmed by gene ontology. 45
Ⅳ. DISCUSSION 48
Ⅴ. CONCLUSION 51
REFERENCES 52
ABBREVIATIONS 57
ABSTRACT IN KOREAN 58
Table 1. sham and HI's expression levels and |log₂FC| of top50 24
Table 2. HI+EPO and HI's expression levels and |log₂FC| of top50 25
Table 3. HI+UCB and HI's expression levels and |log₂FC| of top50 26
Table 4. HI+EPO+UCB and HI's expression levels and |log₂FC| of top50 27
Table 5. HI+EPO+UCB and HI+EPO's expression levels and |log₂FC| of top50 28
Table 6. HI+EPO+UCB and HI+UCB's expression levels and |log₂FC| of top50 29
Table 7. Gene ontology pathways of G6 group 34
Table 8. sham and HI's expression levels and |log₂FC| of top50 37
Table 9. HI+EPO and HI's expression levels and |log₂FC| of top50 38
Table 10. HI+UCB and HI's expression levels and |log₂FC| of top50 39
Table 11. HI+EPO+UCB and HI's expression levels and |log₂FC| of top50 40
Table 12. HI+EPO+UCB and HI+EPO's expression levels and |log₂FC| of top50 41
Table 13. HI+EPO+UCB and HI+UCB's expression levels and |log₂FC| of top50 42
Table 14. Gene ontology pathways of G5 group 47
Figure 1. Changes in animal models after administration of EPO and UCB. 21
Figure 2. Workflow of total genes analysis 22
Figure 3. Venn diagram of gene in each group after DEGs. 31
Figure 4. Heatmap of gene expression level pattern in each group 33
Figure 5. Workflow of analysis after immune-related genes exclusion 35
Figure 6. Venn diagram of gene in each group after DEGs. 44
Figure 7. Heatmap of gene expression level pattern in each group 46